Top Assistant Controller Jobs in San Francisco Bay Area, CA

8 Days AgoSaved
Easy Apply
In-Office
San Francisco Bay Area, CA
Easy Apply
252K-315K Annually
Expert/Leader
252K-315K Annually
Expert/Leader
Artificial Intelligence • Enterprise Web • Information Technology • Productivity • Sales • Software • Database
Leads the accounting function for a high-growth SaaS company, owning monthly, quarterly, and annual close processes, external audits, internal controls, accounting policies, and IPO readiness. Manages and develops the accounting team, partners on technical accounting matters including ASC 606, ASC 350-40, and ASC 718, and drives financial systems, automation, and AI tooling improvements. Reports financial risks and close status to the Controller and CFO.
Top Skills: Ai AutomationNetSuiteStripeZip
Reposted 14 Days AgoSaved
Remote or Hybrid
San Francisco Bay Area, CA
73K-98K Annually
Senior level
73K-98K Annually
Senior level
Cloud • Fintech • Software • Business Intelligence • Consulting • Financial Services
Manage day-to-day financial reporting, general ledger accuracy, month-end close, and client reporting for nonprofit clients. Coordinate project tasks, review balance sheets and account classifications, prepare reporting packages and work papers, and assist in managing accountants and developing best practices.
Top Skills: Accounting SoftwareMicrosoft Office Suite
Reposted 11 Hours AgoSaved
In-Office
San Francisco Bay Area, CA
120K-130K Annually
Senior level
120K-130K Annually
Senior level
Professional Services • Social Impact
Leads accounting operations for two entities, including monthly and annual close, consolidated financial statements, reconciliations, intercompany billing, budgeting, forecasting, tax and licensing compliance, audit coordination, and internal controls. Supervises project accounting, accounts payable, and accounts receivable staff; supports accounting systems and process improvements; and explains job-cost results to operations and project managers. Requires expertise in job costing, WIP schedules, ASC 606, multi-entity consolidation, US GAAP, and financial reporting.
Top Skills: Erp SystemsExcelSage 300 Construction And Real Estate
YesterdaySaved
Remote
San Francisco Bay Area, CA
171K-199K Annually
Senior level
171K-199K Annually
Senior level
Agency • HR Tech • On-Demand • Professional Services
Oversee accounting operations, including revenue review, expense management, month-end close, reconciliations, financial statements, staff accountant supervision, audits, tax compliance, 1099 filings, and process improvements. Support FP&A with reporting and help implement new financial software while maintaining accurate and efficient financial processes.
Top Skills: ExcelNetSuiteTripactions
2 Days AgoSaved
Remote
San Francisco Bay Area, CA
110K-110K Annually
Senior level
110K-110K Annually
Senior level
Marketing Tech • Software
The Assistant Controller owns month-end close, accounts receivable and collections, accounts payable, expense compliance, cash forecasting, and accounting process improvement. The role supports finance system implementations, documents standardized workflows, mentors accounting staff, and provides accurate financial analysis to leadership. It requires hands-on accounting experience, QuickBooks Online expertise, familiarity with AP or collections platforms, Google Workspace proficiency, and demonstrated use of Claude to improve finance workflows.
Top Skills: Bill Spend & ExpenseBill.ComClaudeGoogle DocsGoogle SheetsGoogle SlidesGoogle WorkspaceNetSuiteQuickbooks OnlineTipalti
2 Days AgoSaved
Remote
San Francisco Bay Area, CA
150K-160K Annually
Senior level
150K-160K Annually
Senior level
Fintech • Financial Services
Own funding structure and SPV accounting, securitization transaction accounting, recurring close, reconciliations, trustee and investor reporting, financial statement support, and internal controls. Oversee treasury, payroll, and compensation accounting while partnering with cross-functional teams on audits, process improvements, automation, and finance operations scaling. The role requires strong US GAAP expertise, structured finance experience, and the ability to lead complex accounting initiatives.
Top Skills: IfrsExcelSoxUs Gaap
2 Days AgoSaved
Remote
San Francisco Bay Area, CA
150K-175K Annually
Expert/Leader
150K-175K Annually
Expert/Leader
Healthtech
Leads accounting operations, financial close, technical accounting, SEC reporting support, SOX 404 controls, audits, treasury activities, ERP transformation, process automation, and remote accounting team development. Requires CPA certification, extensive public accounting and public company experience, and expertise in U.S. GAAP, internal controls, audit readiness, and enterprise finance systems.
Top Skills: AchAsc 606Asc 805Asc 842Erp SystemsMicrosoft DynamicsSec Reporting SystemsSox 404U.S. GaapWire TransfersWorkday Financials
Reposted 7 Days AgoSaved
Remote
San Francisco Bay Area, CA
150K-160K Annually
Senior level
150K-160K Annually
Senior level
Fintech • Payments • Software • Travel
Oversee month-end and quarter-end close, technical accounting, audits, controls, financial reporting, and accounting systems. Lead process improvements and financial system optimization while ensuring GAAP compliance. Manage, mentor, and develop the accounting team; partner with the Controller on policy and audit readiness. The role also supports multi-entity accounting, system scalability, and special projects in a high-growth B2B SaaS environment.
Top Skills: Asc 606ErpGaapExcelMS OfficeNetSuite
22 Days AgoSaved
In-Office
San Francisco Bay Area, CA
150K-180K Annually
Senior level
150K-180K Annually
Senior level
Software • Energy • Solar • Renewable Energy
Oversee global accounting operations, financial close, consolidated reporting, cost and manufacturing accounting, internal controls, audits, tax compliance, and NetSuite optimization. Lead the accounting team, improve processes through automation, and partner with FP&A, Operations, Engineering, Supply Chain, and Commercial teams to support financial transparency, scalability, and global expansion.
Top Skills: Ai Automation ToolsNetSuite
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Reposted 20 Days AgoSaved
Remote
San Francisco Bay Area, CA
132K-160K Annually
Senior level
132K-160K Annually
Senior level
Software • Business Intelligence
Assistant Controller will lead monthly, quarterly, and annual close processes; oversee general ledger, accounts payable, payroll, fixed assets, and expense reporting; ensure U.S. GAAP compliance; coordinate audits and tax requirements; improve accounting systems and processes; and supervise accounting staff or outsourced partners. The role supports financial reporting, internal controls, ERP enhancements, and operational scaling in a fast-growing SaaS environment.
Top Skills: AvalaraErp SystemsExcelPaystandSage IntacctTesorioTipalti
One Month AgoSaved
Remote
San Francisco Bay Area, CA
90K-120K Annually
Mid level
90K-120K Annually
Mid level
Angel or VC Firm • Professional Services
Manage relationships with multiple venture capital and private equity clients while overseeing accounting workflows, reconciliations, journal entries, general ledgers, month-end close, investment records, financial statements, audits, and tax coordination. Review junior team members’ work, delegate tasks, provide coaching, and support complex accounting matters involving US GAAP, partnership accounting, and allocation waterfalls. Use Xero, FundPanel, and Excel to deliver accurate client reporting and investor correspondence.
Top Skills: FundpanelExcelQuickbooksUs GaapXero
Reposted 8 Days AgoSaved
In-Office or Remote
San Francisco Bay Area, CA
109K-134K Annually
Senior level
109K-134K Annually
Senior level
Aerospace
Support the Business Unit Controller in accounting and FP&A: prepare monthly management reporting, budgets, forecasts, cash flow, SOX compliance and audits, analyze P&L and balance sheet drivers, manage transactional flows (O2C, P2P, MTO), and lead process improvements and staff development.
Reposted One Month AgoSaved
Remote
San Francisco Bay Area, CA
165K-165K Annually
Senior level
165K-165K Annually
Senior level
Information Technology • Business Intelligence • Consulting
The Assistant Controller will oversee financial reporting, maintain internal controls, and automate accounting processes while partnering with the finance team and external auditors.
Top Skills: Financial ReportingU.S. Gaap
Reposted 2 Months AgoSaved
In-Office
San Francisco Bay Area, CA
128K-135K Annually
Senior level
128K-135K Annually
Senior level
Professional Services • Real Estate • Social Impact
Lead audit processes for property and corporate financials, prepare consolidated schedules, manage general accounting (AP/AR, interim financials, grant billing), supervise accounting staff, drive systems integrations and process improvements, and review project legal/financial documents to determine allocations and fees.
Top Skills: ExcelMicrosoft OutlookMicrosoft TeamsMicrosoft Word
One Month AgoSaved
Remote
San Francisco Bay Area, CA
Senior level
Senior level
AdTech • Marketing Tech • Sales
Supports corporate accounting and financial operations, including general ledger, revenue recognition, billing, financial reporting, audits, tax, treasury, GAAP compliance, and internal controls. Partners across Finance, Sales, and Revenue Operations to improve order-to-cash processes and systems. Supports ERP enhancements, accounting policy implementation, process automation, M&A integrations, financial carve-outs, KPI development, and accounting team mentoring.
Top Skills: Ai AutomationAvalaraErp SystemsNetSuiteRampSalesforce
Reposted 2 Months AgoSaved
In-Office
San Francisco Bay Area, CA
165K-200K Annually
Senior level
165K-200K Annually
Senior level
Digital Media • Information Technology
Oversee monthly, quarterly, and year-end close; maintain general ledger and reconciliations; apply U.S. GAAP; prepare financial statements; support audits; improve accounting processes through automation and systems integrations; mentor team and partner with cross-functional leaders.
Top Skills: Excel
2 Months AgoSaved
In-Office
San Francisco Bay Area, CA
120K-140K Annually
Mid level
120K-140K Annually
Mid level
3D Printing • Healthtech
Own day-to-day accounting operations including month-end close, reconciliations, financial statement preparation (U.S. GAAP), AP/AR, payroll support, cash management, audit/tax coordination, controls, budgeting/forecasting, and finance systems implementation to support a high-growth health-tech company.
Top Skills: ErpExcelNetSuiteQuickbooks
2 Months AgoSaved
In-Office
San Francisco Bay Area, CA
130K-135K Annually
Senior level
130K-135K Annually
Senior level
Social Impact
Support the Senior Controller in managing the Finance Department, maintaining internal controls, preparing monthly and consolidated financial statements, reconciling ledgers and intercompany accounts, overseeing billing and tax filings, supervising the Accounting Manager, and leading audits, forecasts, and ad-hoc financial analysis and projects.
Top Skills: ErpMS OfficeNetSuiteYardi
Reposted 2 Months AgoSaved
Remote
San Francisco Bay Area, CA
90K-90K Annually
Senior level
90K-90K Annually
Senior level
Financial Services
Provide hands-on bookkeeping and accounting support for a portfolio of clients. Work with a Portfolio Manager to perform day-to-day bookkeeping, communicate with clients, ensure accuracy and timeliness, flag issues, and collaborate with teammates to deliver consistent remote accounting services.
Top Skills: Cloud-Based Accounting SoftwareQuickbooks
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